Mapping Preview

Calls both the Map Reads and the Bam Statistics. Its purpose is to run a mapper on a subset of the reads and get a summary report of the mapping.

In the options the application accepts any values that are also accepted by

the additional parameter is
  • mapMethod=<mapping method> choose any of the available mapping methods

By default this application sets the parameter
  • nReads=1000000

Created by hubert. Last Modification: Thursday July 5, 2012 14:49:23 CEST by hubert.